Based on the gene's FPKM score (from RNA-seq data), representing the transcriptional activity level in specific tissues.
These track the number of other enhancers (EWS) or genes (GWS) located in the "window" between the enhancer and gene of interest, accounting for potential interference or competition. theagle.Cely.1.var
: Likely represents the first variable or a specific variant in a ranked list of potential regulatory interactions. Based on the gene's FPKM score (from RNA-seq
Captures how multiple enhancers might work together to regulate a single gene. Contextual Meaning of the Name Based on the structure of the string: theagle.Cely.1.var
: This often denotes cell-type specificity , a core feature of EAGLE which allows it to distinguish between interactions that only occur in certain tissues.